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[[MultiModal|Back to Multimodal Top]] [[FsTutorial/MultiModal|Back to Multimodal Top]]

Back to Multimodal Top 

cd $TUTORIAL/mmtutorial/dti

tkregister2 --mov lowb.nii --reg register.dat --surf

mri_vol2vol --mov fa.nii \
  --reg register.dat \
  --fstarg --interp nearest \
  --o fa.anat.mgh

mri_vol2vol --mov adc.nii \
  --reg register.dat \
  --fstarg --interp nearest \
  --o adc.anat.mgh

mri_segstats \
  --seg $SUBJECTS_DIR/$subject/mri/aseg.mgz \
  --ctab $FREESURFER_HOME/FreeSurferColorLUT.txt \
  --nonempty --excludeid 0 \
  --i fa.anat.mgh --sum fa.stats

FsTutorial/MultiModalDtiIndividual_tktools (last edited 2014-01-28 16:27:11 by LouisVinke)