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FreeSurfer Course, September 28 - Oct 1

7:30 - 9:30am Registration Desk Open

Monday, September 28th - Introduction / Single Subject Analysis /Troubleshooting

Time

Title

Type

Lecturer

8:00 - 8:30

optional - A Non-physicist's Intro to MR SpinBench

talk

Dylan Tisdall

8:30 - 9:00

optional - Unix Tutorial for FreeSurfer Users

talk/tutorial

Allison Moreau

9:00 - 9:15

optional - Intro to FreeSurfer Jargon

talk

Allison Moreau & Lilla Zollei

9:15 - 9:30

break

9:30 - 10:00

Introduction to Freesurfer

talk

Bruce Fischl

10:00 - 11:10

Analyzing the Individual Subject

talk

Doug Greve

11:10 - 11:30

break

11:30 - 12:10

Surface-based Analysis: Intersubject Smoothing & Registration

talk

Doug Greve

12:10 - 1:10

Lunch (Suggestions for where to eat)

--

--

1:10 - 1:30

Freeview demonstration

demo

Lee Tirrell

1:30 - 2:30

Interaction with Individual Subject Data Tutorial

tutorial

staff

2:30 - 3:00

FreeSurfer Troubleshooting

talk

Bruce Fischl

3:00 - 3:20

break

3:20 - 4:00

Quality Checking a Recon

demo

Ani Varjabedian

4:00 - 5:00

Troubleshooting Tutorial

tutorial

staff

5:00 - 5:15

Question and Answer Session (Answers to online questions here)

talk

staff

Boston Beer Works location information here and here.
Meet us in front of Building 149 to catch the 6:15pm shuttle bus (it leaves on time!).
If you miss us, we are taking the MGH/Navy Yard shuttle to North Station. From there, cross the street to get to Canal Street. Boston Beer Works will be down that street, on your right. (If you miss the 6:15 bus, the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).

Tuesday, September 29th - Diffusion / Group Analysis / ROI Analysis / Longitudinal / fMRI

Time

Title

Type

Lecturer

9:00 - 9:40

Group Analysis

talk

Emily Lindemer

9:40 - 10:20

Group Analysis Tutorial

tutorial

staff

10:20 - 10:40

break

10:40 - 11:00

Multiple Comparisons

talk

Martin Reuter

11:00 - 11:20

QDEC demonstration

demo

Martin Reuter

11:20 - 11:40

Multiple Comparisons Tutorial

tutorial

staff

11:40 - 12:20

QDEC Tutorial

tutorial

staff

12:20 - 1:20

Lunch

--

--

1:20 - 1:50

ROI Analysis

talk

Doug Greve

1:50 - 2:20

ROI Analysis Tutorial

tutorial

staff

2:20 - 2:40

break

2:40 - 3:10

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Martin Reuter

3:10 - 3:50

Longitudinal Tutorial

tutorial

staff

3:50 - 4:00

break

4:00 - 4:30

Multi-Modal Integration, Part 1

talk

Doug Greve

4:30 - 5:30

Basics of fMRI Analysis

talk

Jon Polimeni

Wednesday, September 30th - fMRI / Multimodal / Diffusion / Future Directions / Q&A

Time

Title

Type

Lecturer

8:30 - 9:15

FSFAST

talk

Doug Greve

9:15 - 9:30

break

9:30 - 10:10

FSFAST

talk

Doug Greve

10:10 - 11:10

FSFAST Tutorial

tutorial

staff

11:10 - 11:40

Multi-Modal Integration, Part 2

talk

Lilla Zollei

11:40 - 12:40

Lunch

--

--

12:40 - 1:55

Multi-Modal Integration Tutorial

tutorial

staff

1:55 - 2:35

Introduction to Diffusion MRI

talk

Anastasia Yendiki

2:35 - 2:55

break & Evaluation

2:55 - 3:45

TRActs Constrained by UnderLying Anatomy (TRACULA)

talk

Anastasia Yendiki

3:45 - 4:30

Tracula Tutorial

tutorial

staff

4:30 - 5:00

Future Directions

talk

TBD

5:00 - 5:15

Question and Answer Session (Answers to online questions here), FsQuiz

talk

staff

Thursday, October 1st - Technical talks

Time

Title

Type

Lecturer

9:00 - 9:30

optional technical talk - Registration Methods

talk

Lilla Zollei

9:30 - 10:30

More Quality Checking a Recon

demo

Allison Stevens

10:30 - 10:50

break & Evaluation

10:50 - 11:20

optional technical talk - MRI Acquisition Methods for Morphometry

talk

Andre van der Kouwe

11:20 - 11:50

optional technical talk - Motion-compensated neuroanatomical imaging

talk

Dylan Tisdall

FsTutorial/Sept2015CourseSchedule (last edited 2017-09-26 11:31:49 by MorganFogarty)