Results 1 - 14 of 14 results out of about 3663 pages. (0.93 seconds)
- FsTutorial/QuestionAnswers . . . 6 matches
- ...rs in the atlas. It could still help to improve the full hippocampus segmentation.
MartinReuter
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'''Question: What is the difference between voxel-based morphometry and the ...
- LongitudinalChangeLog . . . 4 matches
- ...e time points id's)
No modifications to the data flow in the base or long stream.
MartinReuter
== FS Version 4.5 ==
Improvements to the new longitudinal stream (modified base s...
- FsTutorial/QuestionAnswersApril2013 . . . 4 matches
- ...lip) etc. Usually NIFTI should be fine (assuming the header did not get corrupted).
MartinReuter
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'''Can you use skull st...
- mri_robust_template . . . 1 match
- ...://reuter.mit.edu/papers/reuter-bias11.pdf
Also see [[FreeSurferMethodsCitation]].
= Reporting Bugs =
Report bugs to <freesurfer@nmr.mgh.harvard.edu>
= Author/s =
MartinReuter...
- mri_robust_register . . . 1 match
- ...tp://reuter.mit.edu/papers/reuter-long12.pdf
Also see [[FreeSurferMethodsCitation]].
= Reporting Bugs =
Report bugs to <freesurfer@nmr.mgh.harvard.edu>
= Author/s =
MartinReuter...
- LongitudinalTwoStageModel . . . 1 match
- ...-pc1.stack.txt
cat testretest.aseg-pc1/sig.table.dat
}}}
See the [[ FsTutorial/GroupAnalysis | Group Analysis Tutorial ]] for more details on {{{mri_glmfit}}}.
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MartinReuter...
- LongitudinalStatistics . . . 1 match
- ... ready for the LinearMixedEffectsModels (usually you would do a smoothing step with mri_surf2surf after the mris_preproc is finished, see the LME description).
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MartinReuter...
- LongitudinalProcessing45 . . . 1 match
- ...
=== Cortical Ribbon Mask (-cortribbon) ===
No change.
=== Add Parcellation to ASeg (-aparc2aseg) ===
No change.
=== Update WMparc(-wmparc) ===
No change.
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MartinReuter...
- LongitudinalProcessing . . . 1 match
- ...ellation to ASeg (-aparc2aseg) ===
Same processing as in cross sectional stream.
=== Update WMparc(-wmparc) ===
Same processing as in cross sectional stream.
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MartinReuter...
- LongitudinalEdits . . . 1 match
- ...
}}}
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*If WM edits were made on the long only, run (for all the longs that were edited):
{{{
recon-all -long tpN1 templateID -autorecon2-wm -autorecon3
}}}
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MartinReuter...
- LongitudinalData . . . 1 match
- ...ate, DTI, ASL). Center for Cognition and Brain Disorders (CCBD) at Hangzhou Normal University (HNU)
http://fcon_1000.projects.nitrc.org/indi/CoRR/html/hnu_1.html
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MartinReuter...
- FsTutorial/LongitudinalTutorial_tktools . . . 1 match
- ...ONG|here]] to see the results of creating a new long file from the edited base and cross-sectional.
You will do the same for MR1.
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MartinReuter , KhoaNguyen , SaradaSivaraman...
- FsTutorial/LongitudinalTutorialV5 . . . 1 match
- ...king edits to the brain.finalsurfs.mgz, save as brain.finalsurfs.manedit.mgz!
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MartinReuter
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== Study Questions ==
*What are the three processing steps and what do they ...
- FsTutorial/LongitudinalTutorial . . . 1 match
- ..."500px}}
The same improvement should have occurred with MR2.longitudinal run.
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MartinReuter
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== Quiz ==
You can test your knowledge of this tutorial by [[https://forms.gl...