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| * How the !FreeSurfer pipeline automatically generates labels for surfaces vertices (producing an annotation file), using an '''"atlas"''' ("gcs") file. | * How the !FreeSurfer pipeline automatically labels a subject's regions (producing an annotation file) by comparing the subject's curvature data to an '''"atlas"''' ("gcs") file. |
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| = Label = |
= The Labeling Process = |
The Automatic Surface Labeling Process; GCA Atlases
Index TableOfContents
Overview
This document provides an overview of two related topics:
How the FreeSurfer pipeline automatically labels a subject's regions (producing an annotation file) by comparing the subject's curvature data to an "atlas" ("gcs") file.
The process of creating one's own atlas file, perhaps to define regions different from the ones mapped in the atlases supplied with FreeSurfer.
The Labeling Process
Xxxx
Label file
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