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mris_curvature_stats [options] <subjectName> <hemi> <curvFile1> [... <curvFileN] | mris_curvature_stats [options] <subjectId> <hemi> <curvFile1> [... <curvFileN] |
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|| argA || brief description || detailed description (eg, help file information) || || argB || brief description || detailed description (eg, help file information) || |
|| subjectId || Subject Id || detailed description (eg, help file information) || || hemi || hemisphere || rh or lh || || curvFile1..curvFileN || List of one or more existing curvature files to input || Note that this program can also calculate (and save) other curvatures from surfaces selected by other options. || |
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|| -flag1 arg1 || brief description || detailed description (eg, help file information) || || -flag2 arg2 || brief description || detailed description (eg, help file information) || |
Not sure if any flagged arguments are actually ''required''. -- GW |
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|| -flag3 arg3 || brief description ||detailed description (eg, help file information) || || -flag4 arg4 || brief description ||detailed description (eg, help file information) || |
|| -a <numberOfAverages>|| Average the curvature <numberOfAverages> times.|| || -o <outputFileStem> || Save processing results to a series of files. This includes condensed text output, histogram files (MatLAB friendly) and curvature files. || || -flag3 arg3 || description || || -flag3 arg3 || description || || -flag3 arg3 || description || || -flag3 arg3 || description || || -flag3 arg3 || description || || -flag3 arg3 || description || || -flag3 arg3 || description || || -flag3 arg3 || description || |
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FreeSurfer, FsFast | FreeSurfer |
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JaneSmith |
GrahamWideman (Program author: RudolphPienaar) |
Index TableOfContents
Name
mris_curvature_stats - will primarily compute the mean and variances for a curvature file (or a set of curvature files). These files can be possibly constrained by a label.
Additionally, 'mris_curvature_stats' can report the max/min curvature values, and compute a simple histogram based on these vales.
Curvatures can also be normalised and constrained to a given range before computation.
Gaussian and mean calculations on a surface structure can be performed.
Finally, all output to the console, as well as any new curvatures that result from the above calculations can be saved to a series of text and binary-curvature files. Please see the descriptions of options for more details.
Synopsis
mris_curvature_stats [options] <subjectId> <hemi> <curvFile1> [... <curvFileN]
Arguments
Positional Arguments
subjectId |
Subject Id |
detailed description (eg, help file information) |
hemi |
hemisphere |
rh or lh |
curvFile1..curvFileN |
List of one or more existing curvature files to input |
Note that this program can also calculate (and save) other curvatures from surfaces selected by other options. |
Required Flagged Arguments
Not sure if any flagged arguments are actually required. -- GW
Optional Flagged Arguments
-a <numberOfAverages> |
Average the curvature <numberOfAverages> times. |
|| -o <outputFileStem> || Save processing results to a series of files. This includes condensed text output, histogram files (MatLAB friendly) and curvature files. ||
-flag3 arg3 |
description |
-flag3 arg3 |
description |
-flag3 arg3 |
description |
-flag3 arg3 |
description |
-flag3 arg3 |
description |
-flag3 arg3 |
description |
-flag3 arg3 |
description |
-flag3 arg3 |
description |
Outputs
volume1 |
description |
volume2 |
description |
Description
description
Examples
Example 1
command foo -i f -o out
description
Example 2
command foo -i f -o out -f fvalue
description
Bugs
None
See Also
["othercommand1"], ["othercommand2"]
Links
Methods Description
description description
References
["References/Lastname###"]
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>
Author/s
GrahamWideman (Program author: RudolphPienaar)