Diff for "FsFastTutorialV6.0"

Differences between revisions 1 and 10 (spanning 9 versions)

This tutorial steps you through the analysis of an fMRI data set with the FreeSurfer Functional Analysis Stream (FSFAST) version 6.0, from organizing the data to group analysis and correction for multiple comparisons in the following 5 steps:

Part 1:

Tutorial Data: Understanding, Downloading, Setting up
Understanding the FS-FAST Directory Structure
FS-FAST Preprocessing

Part 2:

FS-FAST First Level (Time Series) Analysis
FS-FAST Group Analysis (Permutation)

Extra Content:

Tutorial Data: FSFast Resting State

-  ⇤ ← Revision 1 as of 2017-02-22 17:13:03 → 
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  Editor: AllisonMoreau
  Comment: created page for FSFAST 6.0 tutorial
+   ← Revision 10 as of 2020-03-16 14:31:35 → ⇥
  Size: 1105
  Editor: MatthewLarrabee
  Comment:
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+This tutorial steps you through the analysis of an fMRI data set with the [[http://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurfer|FreeSurfer]] Functional Analysis Stream (FSFAST) version 6.0, from organizing the data to group analysis and correction for multiple comparisons in the following 5 steps:
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-  This tutorial steps you through the analysis of an fMRI data set with the [[http://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurfer|FreeSurfer]] Functional Analysis Stream (FSFAST) version 6.0, from organizing the data to group analysis and correction for multiple comparisons in the following 5 steps.
+'''Part 1: '''
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/TutorialData|Tutorial Data: Understanding, Downloading, Setting up]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastDirStruct|Understanding the FS-FAST Directory Structure]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastPreProc|FS-FAST Preprocessing]]
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-  [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/TutorialData_freeview|A. Tutorial Data: Understanding, Downloading, Setting up]]
  [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastDirStruct_freeview|B. Understanding the FS-FAST Directory Structure]]
  [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastPreProc_freeview|C. FS-FAST Preprocessing]]
  [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastFirstLevel_freeview|D. FS-FAST First Level (Time Series) Analysis]]
  [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastGroupLevel_freeview|E. FS-FAST Group Analysis]]
+'''Part 2:'''
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastFirstLevel|FS-FAST First Level (Time Series) Analysis]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastGroupLevelPerm|FS-FAST Group Analysis (Permutation)]]
 .
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-  Presentations that might be helpful:

 1. [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fmri.april2011.pdf|Introduction to fMRI Analysis]] (General, not FS-FAST Specific)
 1. [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|Introduction to fMRI Analysis with FSFAST]]
 1. [[http://nmr.mgh.harvard.edu/~greve/fsfast.intro.ppt|Extended description of FSFAST]]
+'''Extra Content: '''
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/fsfastrestingstatetutorial|Tutorial Data: FSFast Resting State]]