Diff for "FsFastTutorialV6.0"

Differences between revisions 2 and 11 (spanning 9 versions)

This tutorial steps you through the analysis of an fMRI data set with the FreeSurfer Functional Analysis Stream (FSFAST) version 6.0, from organizing the data to group analysis and correction for multiple comparisons in the following 5 steps:

Part 1:

Tutorial Data: Understanding, Downloading, Setting up
Understanding the FS-FAST Directory Structure
FS-FAST Preprocessing

Part 2:

FS-FAST First Level (Time Series) Analysis
FS-FAST Group Analysis (Permutation)

Extra Content:

Resting state fMRI processing with FSFAST

-  ⇤ ← Revision 2 as of 2017-02-22 17:15:40 → 
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  Editor: AllisonMoreau
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+   ← Revision 11 as of 2020-03-16 14:39:16 → ⇥
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- . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/TutorialData_freeview|A. Tutorial Data: Understanding, Downloading, Setting up]]
 . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastDirStruct_freeview|B. Understanding the FS-FAST Directory Structure]]
 . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastPreProc_freeview|C. FS-FAST Preprocessing]]
 . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastFirstLevel_freeview|D. FS-FAST First Level (Time Series) Analysis]]
 . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastGroupLevel_freeview|E. FS-FAST Group Analysis]]
+'''Part 1: '''
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/TutorialData|Tutorial Data: Understanding, Downloading, Setting up]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastDirStruct|Understanding the FS-FAST Directory Structure]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastPreProc|FS-FAST Preprocessing]]
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- Presentations that might be helpful:
+'''Part 2:'''
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastFirstLevel|FS-FAST First Level (Time Series) Analysis]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastGroupLevelPerm|FS-FAST Group Analysis (Permutation)]]
 .
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- * [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fmri.april2011.pdf|Introduction to fMRI Analysis]] (General, not FS-FAST Specific)
 * [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|Introduction to fMRI Analysis with FSFAST]]
 * [[http://nmr.mgh.harvard.edu/~greve/fsfast.intro.ppt|Extended description of FSFAST]]
+'''Extra Content: '''
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/fsfastrestingstatetutorial|Resting state fMRI processing with FSFAST]]