Diff for "FsFastTutorialV6.0"

Differences between revisions 4 and 9 (spanning 5 versions)

This tutorial steps you through the analysis of an fMRI data set with the FreeSurfer Functional Analysis Stream (FSFAST) version 6.0, from organizing the data to group analysis and correction for multiple comparisons in the following 5 steps:

Part 1:

Tutorial Data: Understanding, Downloading, Setting up
Understanding the FS-FAST Directory Structure
FS-FAST Preprocessing

Part 2:

FS-FAST First Level (Time Series) Analysis
FS-FAST Group Analysis (Permutation)

-  ⇤ ← Revision 4 as of 2017-02-22 18:09:23 → 
  Size: 1302
  Editor: AllisonMoreau
  Comment: updated links to point to 6.0 pages
+   ← Revision 9 as of 2018-09-30 20:19:43 → ⇥
  Size: 967
  Editor: EmmaBoyd
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 3:
- . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/TutorialData|A. Tutorial Data: Understanding, Downloading, Setting up]]
 . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastDirStruct|B. Understanding the FS-FAST Directory Structure]]
 . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastPreProc|C. FS-FAST Preprocessing]]
 . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastFirstLevel|D. FS-FAST First Level (Time Series) Analysis]]
 . [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastGroupLevel|E. FS-FAST Group Analysis]]
+'''Part 1: '''
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/TutorialData|Tutorial Data: Understanding, Downloading, Setting up]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastDirStruct|Understanding the FS-FAST Directory Structure]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastPreProc|FS-FAST Preprocessing]]

'''Part 2:'''
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastFirstLevel|FS-FAST First Level (Time Series) Analysis]]
 . [[https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastGroupLevelPerm|FS-FAST Group Analysis (Permutation)]]
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-Presentations that might be helpful:

 * [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fmri.april2011.pdf|Introduction to fMRI Analysis]] (General, not FS-FAST Specific)
 * [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|Introduction to fMRI Analysis with FSFAST]]
 * [[http://nmr.mgh.harvard.edu/~greve/fsfast.intro.ppt|Extended description of FSFAST]]