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||9:30 - 9:45 || '''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt|Intro to FreeSurfer Jargon|&do=get]] ||talk || Allison Stevens ||
||9:45 - 10:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.njs.ppt|Introduction to Freesurfer|&do=get]] ||talk || Nick Schmansky ||
||10:15 - 10:45 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.njs.ppt|FreeSurfer Applications|&do=get]], [[Articles]] ||talk || Nick Schmansky ||
||10:45 - 11:15 ||'''break''' || || ||
||11:15 - 12:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk || J. Eugenio Iglesias ||
||12:15 - 1:15 ||'''lunch''' ||-- ||-- ||
||1:15 - 1:45 ||Tkmedit/Tksurfer demonstration ||demo || Nick Schmansky ||
||1:45 - 2:45 ||[[FsTutorial/OutputData|Interaction with Individual Subject Data Tutorial]] ||tutorial ||staff ||
||2:45 - 3:15 ||'''break''' || || ||
||3:15 - 3:45
||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]] ||talk ||Andre van der Kouwe||
||3:45- 4:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.AS.ppt|Failure Modes|&do=get]] ||talk || Allison Stevens ||
||4:15 - 5:15 ||Troubleshooting Demonstration, [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff, Allison ||
||9:30 - 10:00 || '''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt|Intro to FreeSurfer Jargon|&do=get]] ||talk || Allison Stevens ||
||10:00 - 10:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.njs.ppt|Introduction to Freesurfer|&do=get]] ||talk || Nick Schmansky ||
||10:30 - 11:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.njs.ppt|FreeSurfer Applications|&do=get]], [[Articles]] ||talk || Nick Schmansky ||
||11:00 - 11:30 ||'''break''' || || ||
||11:30 - 12:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk || J. Eugenio Iglesias ||
||12:30 - 1:30 ||'''lunch''' ||-- ||-- ||
||1:30 - 2:00 ||Tkmedit/Tksurfer demonstration ||demo || Nick Schmansky ||
||2:00 - 3:00 ||[[FsTutorial/OutputData|Interaction with Individual Subject Data Tutorial]] ||tutorial ||staff ||
||3:00 - 3:30 ||'''break''' || || ||
||3:30 -
4:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]] ||talk ||Andre van der Kouwe||
||4:00 - 4:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.AS.ppt|Failure Modes|&do=get]] ||talk || Allison Stevens ||
||4:30 - 5:30 ||Troubleshooting Demonstration, [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff, Allison ||

FreeSurfer Course, 27-29 June 2012

Amsterdam, Netherlands

Home page: www.freesurfercourseamsterdam.nl

Hosted by: Dept. of Radiology, VU University Medical Center

Venue: http://www.griffioen.vu.nl/nl/zaalverhuur/zalen/griffioenzaal.asp

Location: Google Maps

Wednesday, June 27th - Introduction / Single Subject / MRI Acquisition / Troubleshooting

Time

Title

Type

Lecturer

8:30 - 9:45

Course Registration (Note: overlaps with optional tutorials)

sign-in

staff

9:00 - 9:30

optional - Unix Tutorial for FreeSurfer Users online practice

tutorial

Allison Stevens

9:30 - 10:00

optional - Intro to FreeSurfer Jargon

talk

Allison Stevens

10:00 - 10:30

Introduction to Freesurfer

talk

Nick Schmansky

10:30 - 11:00

FreeSurfer Applications, Articles

talk

Nick Schmansky

11:00 - 11:30

break

11:30 - 12:30

Analyzing the Individual Subject

talk

J. Eugenio Iglesias

12:30 - 1:30

lunch

--

--

1:30 - 2:00

Tkmedit/Tksurfer demonstration

demo

Nick Schmansky

2:00 - 3:00

Interaction with Individual Subject Data Tutorial

tutorial

staff

3:00 - 3:30

break

3:30 - 4:00

MRI Acquisition Methods for Morphometry

talk

Andre van der Kouwe

4:00 - 4:30

Failure Modes

talk

Allison Stevens

4:30 - 5:30

Troubleshooting Demonstration, Troubleshooting Tutorial

tutorial

staff, Allison

Thursday, June 28th - MRI Basics / Registration / ROIs / Group Analysis/ Longitudinal / Multimodal

Time

Title

Type

Lecturer

9:00 - 9:30

A Non-physicist's Intro to MR

talk

Andre van der Kouwe

9:30 - 10:30

Registration & Multimodal Methods

talk

Lilla Zollei

10:30 - 10:45

break

10:45 - 11:15

ROI Analysis

talk

Nick Schmansky

11:15 - 11:45

ROI Analysis Tutorial

tutorial

staff

11:45 - 12:45

lunch

--

--

12:45 - 1:45

Group Analysis / GLM / Multiple Comparisons

talk

J. Eugenio Iglesias

1:45 - 2:15

QDEC demonstration

demo

Nick Schmansky

2:15 - 2:45

break

2:45 - 3:15

Group Analysis / Multiple Comparisons - mri_glmfit Tutorial

tutorial

staff

3:15 - 3:45

Group Analysis - qdec Tutorial

tutorial

staff

3:45 - 4:15

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Lilla Zollei

4:15 - 5:00

Freeview Demo, Longitudinal Tutorial

tutorial

staff, Allison Stevens

4:15 - 5:00

Multi-Modal Integration Tutorial

tutorial

staff

Friday, June 29th - Diffusion / Tractography / MoCo / Q&A

Time

Title

Type

Lecturer

9:00 - 9:30

Diffusion Data Processing,dtrecon intro

talk

J. Eugenio Iglesias

9:30 - 10:30

Diffusion Processing Tutorial

tutorial

staff

10:30 - 11:00

break

11:00 - 11:30

TRActs Constrained by UnderLying Anatomy (TRACULA)

talk

Lilla Zollei

11:30 - 12:30

Tracula Tutorial

tutorial

staff

12:30 - 1:30

lunch

--

--

1:30 - 2:00

Motion-compensated neuroanatomical imaging

talk

Andre van der Kouwe

2:00 - 3:00

Quality Checking a Recon

demo

Allison Stevens

3:00 - 3:30

break and evaluations

3:30 - 4:00

Question and Answer Session, FsQuiz

talk

staff

FsTutorial/Amsterdam2012CourseSchedule (last edited 2012-07-30 10:43:32 by NickSchmansky)