Differences between revisions 23 and 24
Deletions are marked like this. Additions are marked like this.
Line 25: Line 25:
||10:00 - 10:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk || Nick Schmansky || ||10:00 - 10:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.ppt|Introduction to Freesurfer|&do=get]] ||talk || Nick Schmansky ||
Line 29: Line 29:
##||''12:45 - 1:15'' ||''Optional Lunch Talk''- '' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|A Non-physicist's Intro to MR]] '' ||''talk'' ||''Dylan Tisdall'' || ##||''12:45 - 1:15'' ||''Optional Lunch Talk''- '' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|&do=get|A Non-physicist's Intro to MR]] '' ||''talk'' ||''Dylan Tisdall'' ||
Line 33: Line 33:
||2:30- 3:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.ppt|Failure Modes]] ||talk || Allison Stevens || ||2:30- 3:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.ppt|Failure Modes|&do=get]] ||talk || Allison Stevens ||
Line 36: Line 36:
||4:30 - 5:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.ppt|FreeSurfer Applications]] ||talk || Nick Schmansky || ||4:30 - 5:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.ppt|FreeSurfer Applications|&do=get]] ||talk || Nick Schmansky ||
Line 43: Line 43:
||9:45 - 10:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer]] ''see also:'' LongitudinalProcessing ||talk || Lilla Zollei || ||9:45 - 10:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] ''see also:'' LongitudinalProcessing ||talk || Lilla Zollei ||
Line 45: Line 45:
||10:30 - 10:45 ||Longitudinal tutorial ||tutorial ||staff ||
||10:45 -11:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis]] ||talk || Allison Stevens || 		||10:30 - 10:45 ||[[FsTutorial/LongitudinalTutorial|Longitudinal Tutorial]] ||tutorial ||staff ||
||10:45 -11:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] ||talk || Allison Stevens ||
Line 49: Line 49:
##||''1:15 - 1:45'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry]]'' ||''talk'' ||''Andre van der Kouwe'' ||
||1:00 - 2:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Diffusion Data Processing]] ||talk ||Lilla Zollei || 		##||''1:15 - 1:45'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|&do=get|MRI Acquisition Methods for Morphometry]]'' ||''talk'' ||''Andre van der Kouwe'' ||
||1:00 - 2:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Diffusion Data Processing|&do=get]] ||talk ||Lilla Zollei ||
Line 52: Line 52:
||2:30 - 3:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Diffusion Data Processing]] ||talk ||Lilla Zollei ||
||3:00 - 4:00 ||Diffusion Processing Tutorial ||tutorial ||staff || 		||2:30 - 3:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.dt_recon-intro.ppt|Diffusion Data Processing|&do=get]] ||talk ||Lilla Zollei ||
||3:00 - 4:00 ||[[FsTutorial/Diffusion|Diffusion Processing Tutorial]] ||tutorial ||staff ||
Line 56: Line 56:
||9:00 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons]] ||talk || Lilla Zollei || ||9:00 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] ||talk || Lilla Zollei ||
Line 62: Line 62:
##||''12:40 - 1:00'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tisdall_moco.pdf|Motion-compensated neuroanatomical imaging]]'' ||''talk'' ||''Dylan Tisdall'' || ##||''12:40 - 1:00'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tisdall_moco.pdf|Motion-compensated neuroanatomical imaging|&do=get]]'' ||''talk'' ||''Dylan Tisdall'' ||
Line 66: Line 66:
##||2:15 - 3:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration]] ||talk ||Doug Greve || ##||2:15 - 3:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration|&do=get]] ||talk ||Doug Greve ||

FreeSurfer Tutorial and Workshop in São Paulo, Brazil

16, 17, & 18 (Sat.,Sun.,Mon.) April 2011

The FreeSurfer Development Team is hosting a three-day course for beginner and experienced users of FreeSurfer. Topics are listed below. There are 40 available spots for this course (see course registration).

Computers will be provided to all pairs of registrants, which will have FreeSurfer and data already installed. Attendees will work in pairs (sharing a computer).

The course will be held at São Paulo healthcare complex of HCFMUSP.

Contact: Pedro Paulo de M. Oliveira Jr. ( ppj at netfilter dot com dot br )

Location

Hospital das Clínicas - Avenida Dr Eneas de Carvalho Aguiar, 44 - São Paulo - SP - Brazil - (hotel,map)

The course will be held at the Radiology Center Building, in the Amphitheatre C.

Saturday, 16 April - Introduction / Single Subject / Troubleshooting

Time

Title

Type

Lecturer

8:30 - 9:00

Course Registration

sign-in

staff

9:00 - 9:30

Unix Tutorial for FreeSurfer Users 1. Surrey, 2. O'Reilly

tutorial

Pedro Paulo de M. Oliveira Jr.

9:30 - 10:00

Intro to FreeSurfer Jargon

talk

Pedro Paulo de M. Oliveira Jr.

10:00 - 10:30

Introduction to Freesurfer

talk

Nick Schmansky

10:30 - 10:45

break

10:45 - 11:45

Analyzing the Individual Subject

talk

Allison Stevens

11:45 - 12:45

Lunch

--

--

12:45 - 1:15

Tkmedit/Tksurfer demonstration

demo

Nick Schmansky

1:15 - 2:15

Interaction with Individual Subject Data Tutorial

tutorial

staff

2:15 - 2:30

break

2:30- 3:00

Failure Modes

talk

Allison Stevens

3:00 - 4:00

Troubleshooting Demonstration, Troubleshooting Tutorial

tutorial

staff, Allison

4:00 - 4:30

Quality Checking a Recon

demo

Allison Stevens

4:30 - 5:00

FreeSurfer Applications

talk

Nick Schmansky

Sunday, 17 April - Longitudinal / Registration / ROIs /Diffusion

Time

Title

Type

Lecturer

9:00 - 9:45

Registration Methods

talk

Lilla Zollei

9:45 - 10:15

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Lilla Zollei

10:15 - 10:30

break

10:30 - 10:45

Longitudinal Tutorial

tutorial

staff

10:45 -11:15

ROI Analysis

talk

Allison Stevens

11:15 - 11:45

ROI Analysis Tutorial

tutorial

staff

11:45 - 1:00

Lunch

--

--

1:00 - 2:15

Diffusion Data Processing

talk

Lilla Zollei

2:15 - 2:30

break

2:30 - 3:00

Diffusion Data Processing

talk

Lilla Zollei

3:00 - 4:00

Diffusion Processing Tutorial

tutorial

staff

Monday, 18 April - Group Analysis / Q&A

9:00 - 10:00

Group Analysis / GLM / Multiple Comparisons

talk

Lilla Zollei

10:00 - 10:30

QDEC demonstration

demo

Nick Schmansky

10:30 - 10:45

break

10:45 - 11:45

Group Analysis / Multiple Comparisons - mri_glmfit Tutorial

tutorial

staff

10:45 - 11:45

Group Analysis - qdec Tutorial

tutorial

staff

11:45 - 1:00

Lunch

--

--

1:00 - 2:15

TBD

TBD

TBD

2:15 - 2:30

break & Evaluation

2:30 - 3:30

TBD

TBD

TBD

3:30 - 4:00

Question and Answer Session, FsQuiz

talk

staff

FsTutorial/Brazil2011CourseSchedule (last edited 2012-06-20 20:29:07 by NickSchmansky)