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 * [[https://surfer.nmr.mgh.harvard.edu/pub/articles/Sabuncu2011_Archives_InPress.pdf|The Dynamics of Cortical and Hippocampal Atrophy in Alzheimer Disease]], Sabuncu, M.R., R.S. Desikan, J. Sepulcre, B.T.T. Yeo, H. Liu, N.J. Schmansky, M. Reuter, M.W. Weiner, R.L. Buckner, R.A. Sperling, B. Fischl (2011). Archives of Neurology, Vol 68 (No. 8), Aug 2011.
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 * [[https://surfer.nmr.mgh.harvard.edu/pub/articles/Sabuncu2011_Archives_InPress.pdf|The Dynamics of Cortical and Hippocampal Atrophy in Alzheimer Disease]], Sabuncu, M.R., R.S. Desikan, J. Sepulcre, B.T.T. Yeo, H. Liu, N.J. Schmansky, M. Reuter, M.W. Weiner, R.L. Buckner, R.A. Sperling, B. Fischl (2011). Archives of Neurology, Vol 68 (No. 8), Aug 2011.
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 * [[https://surfer.nmr.mgh.harvard.edu/pub/articles/Sabuncu2011_Archives_InPress.pdf|The Dynamics of Cortical and Hippocampal Atrophy in Alzheimer Disease]], Sabuncu, M.R., R.S. Desikan, J. Sepulcre, B.T.T. Yeo, H. Liu, N.J. Schmansky, M. Reuter, M.W. Weiner, R.L. Buckner, R.A. Sperling, B. Fischl (2011). Archives of Neurology, Vol 68 (No. 8), Aug 2011.
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 * [[https://surfer.nmr.mgh.harvard.edu/pub/articles/Sabuncu2011_Archives_InPress.pdf|The Dynamics of Cortical and Hippocampal Atrophy in Alzheimer Disease]], Sabuncu, M.R., R.S. Desikan, J. Sepulcre, B.T.T. Yeo, H. Liu, N.J. Schmansky, M. Reuter, M.W. Weiner, R.L. Buckner, R.A. Sperling, B. Fischl (2011). Archives of Neurology, Vol 68 (No. 8), Aug 2011.
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 * [[https://surfer.nmr.mgh.harvard.edu/ftp/articles/Ghosh_2010_KidRegistration.pdf|Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age.]], Satrajit S. Ghosh, Sita Kakunoori, Jean Augustinack, Alfonso Nieto-Castanon, Ioulia Kovelman, Nadine Gaab, Joanna A. Christodoulou, Christina Triantafyllou, John D.E. Gabrieli, Bruce Fischl (2010). NeuroImage 53 (2010) 85–93     * [[https://surfer.nmr.mgh.harvard.edu/ftp/articles/Ghosh_2010_KidRegistration.pdf|Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age.]], Satrajit S. Ghosh, Sita Kakunoori, Jean Augustinack, Alfonso Nieto-Castanon, Ioulia Kovelman, Nadine Gaab, Joanna A. Christodoulou, Christina Triantafyllou, John D.E. Gabrieli, Bruce Fischl (2010). NeuroImage 53 (2010) 85–93


Techniques


Published material describing the techniques used in FreeSurfer (please cite our software!, see also boilerplate text):

surface reconstruction

inter-subject spherical averaging

thickness measurement

cortical parcellation

subcortical segmentation

longitudinal processing

related methodological papers

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Citations


Published material citing Freesurfer:

cortical thickness

cortical surface area

local gyrification index (LGI)

clinical biomarkers

volumetric

white matter

longitudinal

entorhinal cortex

  • Detection of entorhinal layer II using 7 Tesla magnetic resonance imaging, Augustinack, Jean C., Andre J. W. van der Kouwe, Megan L. Blackwell, David H. Salat, Christopher J. Wiggins, Matthew P. Frosch, Graham C. Wiggins, Andreas Potthast, Lawrence L. Wald, Bruce R. Fischl, (2005). Annals of Neurology, 57(4):489-494.

  • Predicting the location of entorhinal cortex from MRI, B. Fischl, A. A. Stevens, N. Rajendran, B. T. T.Yeo, D. N. Greve, K. V. Leemput, J. R. Polimeni, S. Kakunoori, R. L. Buckner, J. Pacheco, D. H. Salat, J. Melcher, M. P. Frosch, B. T. Hyman, P. E. Grant, B. R. Rosen, A. J.W. van der Kouwe, G. C. Wiggins, L. L. Wald, J. C. Augustinack, (2009). NeuroImage (2009).

cortical surface shape and folding analysis

surface-based analysis (SBA)

SBA vs. VBM

diffusion analysis

CBF - cerebral blood flow

cortical flat-patches

FS-FAST

evaluations

Publications (last edited 2021-05-03 08:49:05 by DevaniCordero)