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 * [[https://surfer.nmr.mgh.harvard.edu/ftp/articles/2014/Koldewyn_Kanwisher.2014.PNAS.pdf | Differences in the right inferior longitudinal fasciculus but no general disruption of white matter tracts in children with autism spectrum disorder,]] K. Koldewyn, A. Yendiki, S. Weigelt, H. Gweona, J. Julian, H. Richardson, C. Malloy, R. Saxe, B. Fischl, and N. Kanwisher, PNAS, Jan. 2014. DOI: 10.1073/pnas.1324037111


Published material describing the methods used in FreeSurfer (please cite our software!, see also boilerplate text):

surface reconstruction

inter-subject spherical averaging

thickness measurement

cortical parcellation

subcortical segmentation

longitudinal processing

tracts constrained by underlying anatomy (TRACULA)

related methodological papers



Published material citing Freesurfer:

(If you have a citation you would like to include in this list please e-mail your request to vinke[at]nmr.mgh.harvard.edu)

cortical thickness

cortical surface area

local gyrification index (LGI)

clinical biomarkers


white matter


tracts constrained by underlying anatomy (TRACULA)

cortical region localization

cortical surface shape and folding analysis

surface-based analysis (SBA)

ROI-based analysis


diffusion analysis

CBF - cerebral blood flow

cortical flat-patches


validation / evaluation

Publications (last edited 2021-05-03 08:49:05 by DevaniCordero)