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 * [[https://surfer.nmr.mgh.harvard.edu/ftp/articles/2011/2011_-_Smith_et_al._-_Neurology.pdf|Correlations between MRI white matter lesion location and executive function and episodic memory]], E E Smith, D H Salat, J Jeng, C R !McCreary, B Fischl, J D Schmahmann, B C Dickerson, A Viswanathan, M S Albert, D Blacker, S M Greenberg (2011). Neurology 76(17):1492-9. DOI:10.1212/WNL.0b013e318217e7c8.


Published material describing the methods used in FreeSurfer (please cite our software!, see also boilerplate text):

surface reconstruction

inter-subject spherical averaging

thickness measurement

cortical parcellation

subcortical segmentation

longitudinal processing

tracts constrained by underlying anatomy (TRACULA)

related methodological papers


  • FreeSurfer, Fischl B (2012). NeuroImage 62(2):774-781.


Published material citing Freesurfer:

(If you have a citation you would like to include in this list please e-mail your request to vinke[at]nmr.mgh.harvard.edu)

cortical thickness

cortical surface area

local gyrification index (LGI)

clinical biomarkers


white matter


tracts constrained by underlying anatomy (TRACULA)

cortical region localization

cortical surface shape and folding analysis

surface-based analysis (SBA)

ROI-based analysis


diffusion analysis

CBF - cerebral blood flow

cortical flat-patches


validation / evaluation

Publications (last edited 2021-05-03 08:49:05 by DevaniCordero)