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Methods


Published material describing the methods used in FreeSurfer (please cite our software!, see also boilerplate text):

surface reconstruction

inter-subject spherical averaging

thickness measurement

topology correction

cortical parcellation

subcortical segmentation

local gyrification index (LGI)

longitudinal processing

tracts constrained by underlying anatomy (TRACULA)

combined volumetric and surface registration (CVS)

boundary-based registration (BBR)

optical coherence tomography (OCT)

positron emission tomography (PET)

related methodological papers

history


Studies


Published material citing Freesurfer:

(If you have a citation you would like to include in this list please e-mail your request to vinke[at]nmr.mgh.harvard.edu)

cortical thickness

cortical surface area

local gyrification index (LGI)

clinical biomarkers

volumetric

white matter

longitudinal

tracts constrained by underlying anatomy (TRACULA)

cortical region localization

cortical surface shape and folding analysis

surface-based analysis (SBA)

ROI-based analysis

SBA vs. VBM

diffusion analysis

cerebral blood flow (CBF)

cortical flat-patches

FS-FAST


Validation / Evaluation


Publications (last edited 2014-09-04 16:21:45 by NickSchmansky)